| 1 | 706 | Advanced Telecommunications Research Institute International | 2960 | 821 | 1012 | 1590 |
| 2 | 7231 | Agriculture Forestry and Fisheries Research Council | 1658 | 6973 | 2538 | 3879 |
| 3 | 4883 | Aichi Industrial Technology Institute | 2794 | 3370 | 2538 | 3879 |
| 4 | 5382 | Aichi Science and Technology Foundation | 4442 | 3967 | 2538 | 3879 |
| 5 | 7510 | Akita Prefectural Industrial Technology Center | 4374 | 7224 | 2538 | 3879 |
| 6 | 7917 | Akita Research Institute of Food and Brewing | 7303 | 7831 | 2538 | 3879 |
| 7 | 5461 | Asian Growth Research Institute | 4224 | 4123 | 2538 | 3879 |
| 8 | 1659 | Building Research Institute | 977 | 943 | 2538 | 2696 |
| 9 | 5686 | Cardiovascular Institute | 5965 | 4284 | 2538 | 3879 |
| 10 | 5954 | Central Institute for Experimental Animals | 5841 | 4693 | 2538 | 3879 |
| 11 | 728 | Central Research Institute of Electrical Power Industry | 1165 | 1249 | 1060 | 1218 |
| 12 | 4658 | Chemicals Evaluation and Research Institute Japan | 3991 | 2949 | 2538 | 3879 |
| 13 | 3434 | Chiba University Hospital | 2626 | 6357 | 2538 | 1832 |
| 14 | 2029 | Chubu Electric Power | 772 | 498 | 2538 | 3509 |
| 15 | 5827 | Coastal Development Institute of Technology | 3831 | 4664 | 2538 | 3879 |
| 16 | 7551 | Construction Engineering Research Institute Foundation | 6922 | 7181 | 2538 | 3879 |
| 17 | 3622 | Economic and Social Research Institute Japan | 1751 | 1511 | 2538 | 3879 |
| 18 | 3058 | Electronic Navigation Research Institute | 2906 | 3034 | 2538 | 3076 |
| 19 | 1463 | Forestry and Forest Products Research Institute | 591 | 4865 | 857 | 1339 |
| 20 | 4494 | Foundation for Biomedical Research and Innovation | 4374 | 2675 | 2538 | 3879 |
| 21 | 3909 | Foundation for MultiMedia Communications (Research Institute of Telecommunications and Economics) | 2629 | 1867 | 2538 | 3879 |
| 22 | 5574 | Fukada Geological Institute | 6533 | 5572 | 2538 | 3509 |
| 23 | 6558 | Fukui Prefectural Institute of Public Health and Environmental Science | 2078 | 6628 | 2538 | 3660 |
| 24 | 2134 | Geological Survey Japan | 199 | 263 | 2538 | 3879 |
| 25 | 6581 | Gifu Research and Development Foundation | 6688 | 5588 | 2538 | 3879 |
| 26 | 1715 | Global Environmental Technology Development | 354 | 351 | 2538 | 3410 |
| 27 | 6798 | Hatano Research Institute, Food and Drug Safety Center | 6957 | 5907 | 2538 | 3879 |
| 28 | 166 | High Energy Accelerator Research Organization | 232 | 384 | 358 | 255 |
| 29 | 7523 | Hiroshima Municipal Industrial Technology Center | 5175 | 7209 | 2538 | 3879 |
| 30 | 2256 | Hitachi Chemical Research Center | 2048 | 1226 | 2538 | 3191 |
| 31 | 5217 | Hokkaido Institute of Environmental Sciences | 4187 | 3722 | 2538 | 3879 |
| 32 | 2648 | Hokkaido Research Organization | 594 | 1686 | 2287 | 3660 |
| 33 | 5357 | Hydrographic and Oceanographic Department Japan Coast Guard | 199 | 4509 | 2538 | 3879 |
| 34 | 7607 | Hyogo Assistive Technology Research and Design Institute | 5486 | 7380 | 2538 | 3879 |
| 35 | 2208 | Hyogo Cancer Center | 5206 | 3787 | 2538 | 1628 |
| 36 | 7383 | Hyogo Medical Center for Adults | 6514 | 6920 | 2538 | 3879 |
| 37 | 5692 | Hyogo Prefectural Institute of Public Health and Environmental Sciences | 4029 | 4474 | 2538 | 3879 |
| 38 | 5149 | Hyogo Prefectural Kobe Children's Hospital | 5560 | 3519 | 2538 | 3879 |
| 39 | 4275 | Independent Administrative Institution Civil Engineering Research Institute of Hokkaido | 424 | 2724 | 2538 | 3879 |
| 40 | 3443 | Independent Administrative Institution National Research Institute for Cultural Properties, Tokyo | 266 | 1464 | 2538 | 3879 |
| 41 | 4811 | Industrial Research Center of Shiga prefecture | 2661 | 3277 | 2538 | 3879 |
| 42 | 7219 | Industrial Research Insutitute of Gunma Prefecture | 3293 | 6854 | 2538 | 3879 |
| 43 | 5635 | Industrial Researich Insutitute of Ishikawa | 2917 | 4470 | 2538 | 3879 |
| 44 | 5687 | Infrastructure Development Institute Japan | 6165 | 4272 | 2538 | 3879 |
| 45 | 3081 | Institute for Environmental Sciences | 5062 | 2111 | 2538 | 3316 |
| 46 | 5949 | Institute for Fermentation Osaka | 6820 | 4580 | 2538 | 3879 |
| 47 | 5191 | Institute for Future Technology | 4029 | 3699 | 2538 | 3879 |
| 48 | 563 | Institute for Molecular Science | 776 | 1278 | 517 | 944 |
| 49 | 4904 | Institute for Science of Labour | 4847 | 3247 | 2538 | 3879 |
| 50 | 4400 | Institute of Applied Energy | 3685 | 2557 | 2538 | 3879 |
| 51 | 6061 | Institute of Behavioral Sciences | 4501 | 4978 | 2538 | 3879 |
| 52 | 1724 | Institute of Developing Economies | 342 | 795 | 2044 | 3509 |
| 53 | 3198 | Institute of Energy Economics Japan | 1231 | 996 | 2538 | 3879 |
| 54 | 6062 | Institute of Inmunology | 6078 | 4845 | 2538 | 3879 |
| 55 | 38 | Institute of Physical and Chemical Research | 154 | 128 | 89 | 56 |
| 56 | 2987 | Institute of Space and Astronautical Science | 558 | 861 | 2538 | 3879 |
| 57 | 4550 | Institute of Systems & Information Technologies | 3269 | 2838 | 2538 | 3879 |
| 58 | 6209 | International Institute for Advanced Studies | 6175 | 5062 | 2538 | 3879 |
| 59 | 3001 | International Media Research Foundation, Tokyo | 984 | 826 | 2538 | 3879 |
| 60 | 627 | International Medical Center Japan | 788 | 1113 | 1986 | 745 |
| 61 | 2866 | International Research Center for Japanese Studies | 136 | 856 | 2538 | 3879 |
| 62 | 3322 | International Superconductivity Technology Center | 4658 | 4050 | 2538 | 2867 |
| 63 | 3359 | Iwate Biotechnology Research Center | 5553 | 5111 | 2538 | 2377 |
| 64 | 4128 | Japan Academy | 3365 | 2141 | 2538 | 3879 |
| 65 | 112 | Japan Aeroespace Exploration Agency | 189 | 85 | 678 | 457 |
| 66 | 171 | Japan Agency for Marine-Earth Science and Technology | 170 | 319 | 182 | 405 |
| 67 | 5609 | Japan Antibiotics Research Association | 5083 | 4232 | 2538 | 3879 |
| 68 | 252 | Japan Atomic Energy Agency | 134 | 571 | 659 | 399 |
| 69 | 2364 | Japan Automobile Research Institute | 3386 | 1778 | 2538 | 2981 |
| 70 | 6043 | Japan Chemical Innovation Institute | 6893 | 4712 | 2538 | 3879 |
| 71 | 3924 | Japan Concrete Institute | 838 | 2044 | 2538 | 3879 |
| 72 | 6743 | Japan Diabetes Foundation | 7128 | 5817 | 2538 | 3879 |
| 73 | 5387 | Japan Economic Research Institute | 5295 | 3892 | 2538 | 3879 |
| 74 | 4409 | Japan Environmental Sanitation Center | 5062 | 2460 | 2538 | 3879 |
| 75 | 3347 | Japan Food Research Laboratories | 4011 | 2507 | 2538 | 3410 |
| 76 | 1461 | Japan Health & Research Institute | 18 | 52 | 2538 | 3879 |
| 77 | 5285 | Japan Health Sciences Foundation | 3434 | 3873 | 2538 | 3879 |
| 78 | 3803 | Japan Heart Foundation | 2113 | 1741 | 2538 | 3879 |
| 79 | 2684 | Japan Institute for Labor Policy and Training | 422 | 610 | 2538 | 3879 |
| 80 | 3253 | Japan Institute of Invention and Innovation | 1508 | 1062 | 2538 | 3879 |
| 81 | 6766 | Japan Institute of Leather Research | 7641 | 5739 | 2538 | 3879 |
| 82 | 6647 | Japan Light Metal Welding and Construction Association Inc | 6735 | 5692 | 2538 | 3879 |
| 83 | 222 | Japan Meteorological Agency | 88 | 90 | 658 | 1438 |
| 84 | 3581 | Japan Organ Transplant Network | 3040 | 1398 | 2538 | 3879 |
| 85 | 3274 | Japan Poison Information Center | 6000 | 1422 | 2538 | 3660 |
| 86 | 5031 | Japan Public Health Association | 5908 | 3339 | 2538 | 3879 |
| 87 | 6294 | Japan Research and Development Center for Metals | 5965 | 5229 | 2538 | 3879 |
| 88 | 64 | Japan Science & Technology Agency | 4 | 29 | 2538 | 58 |
| 89 | 4168 | Japan Space Systems | 3346 | 2207 | 2538 | 3879 |
| 90 | 2042 | Japan Synchrotron Radiation Research Institute | 752 | 1031 | 610 | 3879 |
| 91 | 4612 | Japan Wildlife Research Center | 5904 | 2728 | 2538 | 3879 |
| 92 | 529 | Japanese Foundation for Cancer Research | 2240 | 1326 | 948 | 592 |
| 93 | 5045 | Kagoshima Prefectural Fisheries Technology and Development Center | 3447 | 5135 | 2538 | 3509 |
| 94 | 5483 | Kagoshima Prefectural Institute of Industrial Technology | 2385 | 4289 | 2538 | 3879 |
| 95 | 4099 | Kanagawa Industrial Technology Research Institute | 2154 | 3135 | 2538 | 3660 |
| 96 | 6778 | Kanagawa Prefectural Institute of Public Health | 3237 | 7207 | 2538 | 3509 |
| 97 | 870 | Kazusa Dna Research Institute | 446 | 1214 | 1926 | 1490 |
| 98 | 1945 | Kitano Hospital | 2546 | 2683 | 2538 | 1934 |
| 99 | 5902 | Kobayasi Institute of Physical Research | 5512 | 4648 | 2538 | 3879 |
| 100 | 6230 | Kohnan Hospital | 6495 | 5055 | 2538 | 3879 |
