| 1 | 239 | Council for Scientific and Industrial Research |  | 570 | 563 | 327 | 378 |
| 2 | 392 | South African Medical Research Council | | 2734 | 1091 | 403 | 419 |
| 3 | 3065 | Wellcome Trust Research Laboratories Nairobi |  | 2794 | 2776 | 685 | 3879 |
| 4 | 1182 | National Institute for Communicable Diseases | | 3605 | 1999 | 751 | 2002 |
| 5 | 769 | Agricultural Research Council Pretoria | | 2310 | 1495 | 802 | 1173 |
| 6 | 465 | South African National Biodiversity Institute | | 374 | 497 | 811 | 1391 |
| 7 | 625 | Human Sciences Research Council of South Africa | | 823 | 953 | 961 | 1309 |
| 8 | 1850 | Ithemba Laboratory for Accelerator-Based Science | | 2903 | 2969 | 1194 | 2822 |
| 9 | 1386 | National Health Laboratory Services | | 3391 | 3193 | 1197 | 1753 |
| 10 | 1151 | MRC Keneba |  | 2568 | 3420 | 1199 | 987 |
| 11 | 1010 | International Centre of Insect Physiology and Ecology | | 3259 | 1545 | 1222 | 1765 |
| 12 | 1689 | South African Institute for Aquatic Biodiversity | | 4402 | 3316 | 1425 | 2220 |
| 13 | 2712 | Ifakara Health Research and Development Center |  | 1129 | 3216 | 1433 | 3509 |
| 14 | 779 | South African Astronomical Observatory | | 2523 | 1092 | 1486 | 1345 |
| 15 | 1144 | African Population and Health Research Center | | 818 | 1801 | 1588 | 1873 |
| 16 | 972 | African Institute for Mathematical Sciences | | 3730 | 1445 | 1715 | 1518 |
| 17 | 1891 | Geological Survey of South Africa | | 3870 | 2583 | 1776 | 2822 |
| 18 | 827 | Kenya Medical Research Institute | | 3312 | 2484 | 1908 | 449 |
| 19 | 2050 | Kenya Agricultural & Livestock Research Organization | | 1170 | 2985 | 2109 | 2782 |
| 20 | 1513 | South African Weather Service | | 4805 | 935 | 2168 | 2981 |
| 21 | 2882 | Council for Mineral Technology | | 3594 | 2601 | 2171 | 3509 |
| 22 | 4420 | National Veterinary Research Institute Vom |  | 7368 | 6022 | 2183 | 3252 |
| 23 | 3380 | Kintampo Health Research Centre |  | 7142 | 5925 | 2226 | 2510 |
| 24 | 2627 | Kenya Marine and Fisheries Research Institute | | 1610 | 3844 | 2294 | 2919 |
| 25 | 2353 | Aurum Institute for Health Research | | 5243 | 4599 | 2422 | 1950 |
| 26 | 4806 | Kenya Institute for Public Policy Research and Analysis | | 4760 | 3909 | 2454 | 3879 |
| 27 | 3454 | Institut Africain des Sciences et de la Technologie pour l'Eau & l'Environnement |  | 412 | 2566 | 2509 | 3660 |
| 28 | 4185 | African Academy of Sciences | | 1449 | 2394 | 2538 | 3879 |
| 29 | 4178 | African Agricultural Technology Foundation | | 4067 | 2164 | 2538 | 3879 |
| 30 | 6824 | African Conservation Centre | | 6954 | 5951 | 2538 | 3879 |
| 31 | 4051 | Africa Rice Center |  | 829 | 2241 | 2538 | 3879 |
| 32 | 3222 | African Medical Research Foundation | | 1360 | 1027 | 2538 | 3879 |
| 33 | 5002 | Anglo Platinum Research Centre | | 5025 | 3357 | 2538 | 3879 |
| 34 | 7854 | Arwyp Medical Centre | | 7137 | 7714 | 2538 | 3879 |
| 35 | 1854 | African Wildlife Foundation | | 2454 | 397 | 2538 | 3410 |
| 36 | 5746 | Botswana Institute for Development Policy Analysis |  | 6486 | 4326 | 2538 | 3879 |
| 37 | 7497 | Centre Africain de Recherches sur Bananiers et Plantains |  | 7775 | 6947 | 2538 | 3879 |
| 38 | 5570 | Centre for Diabetes and Endocrinology | | 5876 | 5617 | 2538 | 3509 |
| 39 | 7370 | Centre d'Etudes et de Recherches Scientifiques de Djibouti |  | 7813 | 6699 | 2538 | 3879 |
| 40 | 4832 | Centre de Recherche Medicale et Sanitaire Niamey |  | 7428 | 6180 | 2538 | 2919 |
| 41 | 3099 | Chris Hani Baragwanath Hospital | | 4916 | 4125 | 2538 | 2584 |
| 42 | 2746 | Centre for Infectious Disease Research in Zambia |  | 3796 | 3727 | 2538 | 2431 |
| 43 | 7622 | Centre International de Recherches Medicales de Franceville |  | 6178 | 7368 | 2538 | 3879 |
| 44 | 7796 | Centre National de Semences Forestieres Ouagadougou | | 7757 | 7521 | 2538 | 3879 |
| 45 | 3022 | Council for the Development of Social Science Research in Africa |  | 1212 | 838 | 2538 | 3879 |
| 46 | 2503 | Council for Scientific and Industrial Research Ghana | | 3712 | 3022 | 2538 | 2510 |
| 47 | 4602 | Desert Research Foundation of Namibia |  | 6089 | 4629 | 2538 | 3410 |
| 48 | 8086 | Ethiopian Agricultural Research Organization |  | 8091 | 8035 | 2538 | 3879 |
| 49 | 7229 | Forestry & Forest Products Research Centre South Africa | | 7655 | 6528 | 2538 | 3879 |
| 50 | 5461 | Grootfontein Agricultural Development Institute | | 3920 | 4146 | 2538 | 3879 |
| 51 | 5387 | Gobabeb Training and Research Centre Walvis Bay | | 6780 | 4724 | 2538 | 3660 |
| 52 | 4639 | Geological Survey of Namibia | | 7815 | 4667 | 2538 | 3316 |
| 53 | 3180 | South African Water Research Commission | | 914 | 1567 | 2538 | 3660 |
| 54 | 875 | World Agroforestry Centre | | 565 | 520 | 2538 | 1380 |
| 55 | 6530 | Lung Institute University of Cape Town | | 6584 | 5500 | 2538 | 3879 |
| 56 | 8013 | Institut de Recherche pour le Developpement Mali |  | 8011 | 7857 | 2538 | 3879 |
| 57 | 3046 | Mpala Research Centre | | 6785 | 3842 | 2538 | 2555 |
| 58 | 6608 | Mauritius Sugar Industry Research Institute |  | 3736 | 5823 | 2538 | 3879 |
| 59 | 6997 | National Agricultural Extension and Research Liaison Services | | 7973 | 5834 | 2538 | 3879 |
| 60 | 7235 | National Food Technology Research Centre Botswana | | 3823 | 6858 | 2538 | 3879 |
| 61 | 5436 | National Metrology Institute of South Africa | | 4279 | 4074 | 2538 | 3879 |
| 62 | 1216 | National Research Foundation | | 868 | 955 | 2538 | 1640 |
| 63 | 4490 | Centre Pasteur du Cameroun | | 4532 | 5533 | 2538 | 3140 |
| 64 | 3156 | Institut Pasteur de Dakar | | 6756 | 4200 | 2538 | 2510 |
| 65 | 8138 | Crops Research Institute Ghana | | 8091 | 8138 | 2538 | 3879 |
| 66 | 4325 | Oceanographic Research Institute South African Association for Marine Biological Research | | 5115 | 4579 | 2538 | 3316 |
| 67 | 4367 | South African National Space Agency SANSA | | 4154 | 2481 | 2538 | 3879 |
| 68 | 4325 | Institut de Recherche pour le Développement Dakar | | 1943 | 6012 | 2538 | 2867 |
| 69 | 6473 | Cape Shoulder Institute | | 6605 | 5420 | 2538 | 3879 |
| 70 | 5081 | Sports Science Institute of South Africa | | 5811 | 3417 | 2538 | 3879 |
| 71 | 6069 | National Astrophysics and Space Science Programme | | 5394 | 4932 | 2538 | 3879 |
| 72 | 2500 | Central Statistical Service | | 849 | 434 | 2538 | 3879 |
| 73 | 3786 | Stellenbosch Institute for Advanced Study | | 4350 | 3347 | 2538 | 3410 |
| 74 | 3827 | Tanzania Wildlife Research Institute | | 7716 | 4585 | 2538 | 2919 |
| 75 | 7872 | Tea Research Foundation of Kenya | | 7973 | 7914 | 2538 | 3660 |
| 76 | 5117 | University Computing Centre Ltd | | 3169 | 3657 | 2538 | 3879 |
| 77 | 2489 | Hartebeesthoek Radio Astronomy Observatory | | 3625 | 2270 | 2538 | 2867 |
| 78 | 7196 | Inkosi Albert Luthuli Central Hospital | | 5371 | 6704 | 2538 | 3879 |
| 79 | 5285 | Climate Prediction and Applications Centre Kenya | | 1817 | 4020 | 2538 | 3879 |
| 80 | 5376 | Infectious Diseases Institute Makerere University |  | 5271 | 3881 | 2538 | 3879 |
| 81 | 7065 | Institute Halieutique et des Sciences Marines |  | 7016 | 6344 | 2538 | 3879 |
| 82 | 7247 | Institut du Sahel | | 6706 | 6687 | 2538 | 3879 |
| 83 | 3320 | Institut Senegalais de Recherches Agricoles | | 225 | 3684 | 2538 | 3191 |
| 84 | 3810 | Joint Clinical Research Center Uganda | | 5062 | 5706 | 2538 | 2510 |
